ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5SK48_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5SK48_nD1

Q5SK48_nD1

UID: 004661248

AlphaFold

Range: 6-365
AlphaFold: AF-Q5SK48
UniProt: Q5SK48 (all domains)

3D Structure

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Related Domains

Browse other domains in Radical_SAM,CofH_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM,CofH_C(2002.1.1.205)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

CofH/MqnC C-terminal region

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q5SK48 UniProt: Q5SK48

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-365