ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cgpA02 - ECOD Domain | ECOD

ECOD/Domains/e8cgpA02

e8cgpA02

UID: 004838103

PDB

Range: A:369-511,A:516-618
PDB: 8CGP chain A(all domains)

Molecule: Leucyl-cystinyl aminopeptidase, pregnancy serum form

3D Structure

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Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

4-bromanyl-5-chloranyl-~{N}-[3-(1~{H}-1,2,3,4-tetrazol-5-yl)phenyl]thiophene-2-sulfonamideUKG
Zinc ionZN
metal

+ 3 additives (1,2-ETHANEDIOL, D-malate, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
D-malateMLT
DI(HYDROXYETHYL)ETHER

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 8CGP RCSB PDB: 8CGP PDBe: 8CGP

Downloads

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