ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cmoA01 - ECOD Domain | ECOD

ECOD/Domains/e8cmoA01

e8cmoA01

UID: 004838542

PDB

Range: A:11-435
PDB: 8CMO chain A(all domains)

Molecule: Photosystem I P700 chlorophyll a apoprotein A1 PsaA

3D Structure

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Related Domains

Browse other domains in PsaA_PsaB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhotosystem II antenna protein-like(5075)

HH-groupPhotosystem II antenna protein-like(5075.1)

TT-groupPhotosystem II antenna protein-like(5075.1.1)

FFamilyPsaA_PsaB(5075.1.1.1)

Ligands

in contact, ≤ 4 Å

Beta-caroteneBCR
(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-olC7Z
Chlorophyll aCLA
Diacyl glycerolDGA
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DGD

Pfam Families

PF00223PsaA_PsaB

Photosystem I psaA/psaB protein

External Links

ECOD PDB View: 8CMO RCSB PDB: 8CMO PDBe: 8CMO

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE

1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDELMG

(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoateNKP

PhylloquinonePQN

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