ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8u01A03 - ECOD Domain | ECOD

ECOD/Domains/e8u01A03

e8u01A03

UID: 004871349

PDB

Range: A:292-479
PDB: 8U01 chain A(all domains)

Molecule: Glycosyl hydrolase family 2, sugar binding domain protein

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2_C →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_2_C(2002.1.1.104)

Ligands

in contact, ≤ 4 Å

D-tagatoseTAG

+ 5 additives (Acetate ion, 1,2-ETHANEDIOL, Glycerol, …)

Acetate ionACT
1,2-ETHANEDIOLEDO
GlycerolGOL
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDMES
DI(HYDROXYETHYL)ETHER

Pfam Families

PF02836Glyco_hydro_2_C

Glycosyl hydrolases family 2, TIM barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8U01 RCSB PDB: 8U01 PDBe: 8U01

Downloads

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