ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8xk7A02 - ECOD Domain | ECOD

ECOD/Domains/e8xk7A02

e8xk7A02

UID: 004876684

PDB

Range: A:423-428,A:432-506,A:508-510,A:512-599
PDB: 8XK7 chain A(all domains)

Molecule: DNA polymerase I, thermostable

3D Structure

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Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyDNA_pol_A(304.48.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (DI(HYDROXYETHYL)ETHER, Sulfate ion)

DI(HYDROXYETHYL)ETHERPEG
Sulfate ionSO4

Shown in the structure viewer.

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 8XK7 RCSB PDB: 8XK7 PDBe: 8XK7

Downloads

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