ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0AAF0D2N0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0AAF0D2N0_F1_nD3

A0AAF0D2N0_F1_nD3

UID: 004947780

AlphaFold

Range: 371-590
AlphaFold: AF-A0AAF0D2N0
UniProt: A0AAF0D2N0 (all domains)
Gene: OdinLCB4_001255

Protein: DNA topoisomerase VI subunit B (EC 5.6.2.2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Topo-VIb_trans →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyTopo-VIb_trans(212.1.1.22)

Pfam Families

PF09239Topo-VIb_trans

Topoisomerase VI B subunit, transducer

ClanCL0329S5

External Links

AlphaFold DB: A0AAF0D2N0 UniProt: A0AAF0D2N0

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-590