ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A5ULK8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A5ULK8_F1_nD2

A5ULK8_F1_nD2

UID: 004953405

AlphaFold

Range: 96-190
AlphaFold: AF-A5ULK8
UniProt: A5ULK8 (all domains)
Gene: Msm_0881

Protein: Hydroxymethylbilane synthase (EC 2.5.1.61)

3D Structure

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Related Domains

Browse other domains in Porphobil_deam →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyPorphobil_deam(7523.1.1.6)

Pfam Families

PF01379Porphobil_deam

Porphobilinogen deaminase, dipyromethane cofactor binding domain

ClanCL0177PBP

External Links

AlphaFold DB: A5ULK8 UniProt: A5ULK8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-190