ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

B1L3D5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B1L3D5_F1_nD1

B1L3D5_F1_nD1

UID: 004954819

AlphaFold

Range: 1-179
AlphaFold: AF-B1L3D5
UniProt: B1L3D5 (all domains)
Gene: amzA

Protein: Archaemetzincin (EC 3.4.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M54 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M54(2498.1.1.35)

Pfam Families

PF07998Peptidase_M54

Peptidase family M54

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: B1L3D5 UniProt: B1L3D5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-179