ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9qc2C1 - ECOD Domain | ECOD

ECOD/Domains/e9qc2C1

e9qc2C1

UID: 005085876

PDB

Range: C:2-461
PDB: 9QC2 chain C(all domains)

Molecule: Aspartate aminotransferase family protein

3D Structure

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Related Domains

Browse other domains in Aminotran_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_3(7577.1.1.2)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

+ 5 additives (1,2-ETHANEDIOL, Glycerol, DI(HYDROXYETHYL)ETHER, …)

1,2-ETHANEDIOLEDO
GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF00202Aminotran_3

Aminotransferase class-III

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 9QC2 RCSB PDB: 9QC2 PDBe: 9QC2

Downloads

Download Domain PDB Full PDB Structure

Tetraethylene glycolPG4

Triethylene glycolPGE

Shown in the structure viewer.