ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7zvfC1 - ECOD Domain | ECOD

ECOD/Domains/e7zvfC1

e7zvfC1

UID: 005125889

PDB

Range: C:1-220
PDB: 7ZVF chain C(all domains)
UniProt: P07711 (all domains)
Gene: CTSL

Molecule: Cathepsin L

3D Structure

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Related Domains

Browse other domains in Peptidase_C1 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyPeptidase_C1(219.1.1.1)

Ligands

in contact, ≤ 4 Å

(2S)-N-[(2S)-1-(dimethylamino)-1-oxidanylidene-3-phenyl-propan-2-yl]-2-oxidanyl-N'-(2-pyridin-2-ylethyl)butanediamideKXL
Sodium ionNA
metal

+ 3 additives (Pentaethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Pentaethylene glycol1PE
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

PF00112Peptidase_C1

Papain family cysteine protease

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 7ZVF RCSB PDB: 7ZVF PDBe: 7ZVF UniProt: P07711

Downloads

Download Domain PDB Full PDB Structure

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