ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dydA2 - ECOD Domain | ECOD

ECOD/Domains/e8dydA2

e8dydA2

UID: 005132649

PDB

Range: A:22-257,A:378-472
PDB: 8DYD chain A(all domains)
UniProt: P31040 (all domains)
Gene: SDHA

Molecule: Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

3D Structure

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Related Domains

Browse other domains in FAD_binding_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyFAD_binding_2(2003.1.2.7)

Ligands

in contact, ≤ 4 Å

Flavin-adenine dinucleotideFAD
Potassium ionK
metal

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
Tetraethylene glycolPG4

Pfam Families

PF00890FAD_binding_2

FAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8DYD RCSB PDB: 8DYD PDBe: 8DYD UniProt: P31040

Downloads

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