ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g8pAAA2 - ECOD Domain | ECOD

ECOD/Domains/e8g8pAAA2

e8g8pAAA2

UID: 005138971

PDB

Range: AAA:41-124
PDB: 8G8P chain AAA(all domains)

Molecule: Coenzyme F420:L-glutamate ligase

3D Structure

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Related Domains

Browse other domains in F420_ligase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupCofE insertion domain(101.25)

TT-groupCofE insertion domain(101.25.1)

FFamilyF420_ligase(101.25.1.1)

Ligands

in contact, ≤ 4 Å

COENZYME F420F42
GUANOSINE-5'-DIPHOSPHATEGDP
GUANOSINE-5'-TRIPHOSPHATEGTP
MANGANESE (II) IONMN
metal
Sodium ionNA
metal

Pfam Families

PF01996F420_ligase

F420-0:Gamma-glutamyl ligase

External Links

ECOD PDB View: 8G8P RCSB PDB: 8G8P PDBe: 8G8P

Downloads

Download Domain PDB Full PDB Structure

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer.