ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8p6gD1 - ECOD Domain | ECOD

ECOD/Domains/e8p6gD1

e8p6gD1

UID: 005161202

PDB

Range: D:1-150,D:183-218,D:248-305
PDB: 8P6G chain D(all domains)

Molecule: Genetically Encoded Green Calcium Indicator YTnC2-5 based on Troponin C from toadfish

3D Structure

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Related Domains

Browse other domains in GFP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupGFP-like(271)

HH-groupGFP-like(271.1)

TT-groupGFP-like(271.1.1)

FFamilyGFP(271.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer.

Pfam Families

Green fluorescent protein

ClanCL0069GFP

External Links

ECOD PDB View: 8P6G RCSB PDB: 8P6G PDBe: 8P6G

Downloads

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