ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8pf4B2 - ECOD Domain | ECOD

ECOD/Domains/e8pf4B2

e8pf4B2

UID: 005162691

PDB

Range: B:2-171,B:289-360
PDB: 8PF4 chain B(all domains)
UniProt: Q389T8 (all domains)
Gene: Tb10.406.0520

Molecule: Trypanothione reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin-adenine dinucleotideFAD
~{N}-(4-fluorophenyl)-~{N}-[[5-[2-(4-fluorophenyl)ethylcarbamoyl]furan-2-yl]methyl]-4-methyl-4-(3-phenylpropyl)-1,4$l^{4}-diazinane-1-carboxamideYIA

+ 3 additives (Dimethyl sulfoxide, Imidazole, DI(HYDROXYETHYL)ETHER)

Dimethyl sulfoxideDMS
ImidazoleIMD
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8PF4 RCSB PDB: 8PF4 PDBe: 8PF4 UniProt: Q389T8

Downloads

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