ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8q3kA5 - ECOD Domain | ECOD

ECOD/Domains/e8q3kA5

e8q3kA5

UID: 005167200

PDB

Range: A:651-710,A:713-724,A:726-767,A:769-859
PDB: 8Q3K chain A(all domains)

Molecule: DNA-directed RNA polymerase RPB1 homolog

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958)

HH-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1)

TT-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1.1)

FFamilyRNA_pol_Rpb1_5,RNA_pol_Rpb1_4(4958.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

PF05000RNA_pol_Rpb1_4

RNA polymerase Rpb1, domain 4

External Links

ECOD PDB View: 8Q3K RCSB PDB: 8Q3K PDBe: 8Q3K

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Full PDB Structure