PDB 8Q3K
ELECTRON MICROSCOPY8 chains22 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
9 domains
e8q3kA1(A:1-311,A:393-395,A:437-439,A:539-541,A:562-562,A:576-576,A:581-586,A:612-612,A:711-712,A:725-725,A:768-768,A:891-895,A:972-974,A:984-986,A:1098-1101)e8q3kA2(A:312-349,A:410-436,A:440-496)e8q3kA3(A:350-392,A:396-409)e8q3kA4(A:497-538,A:542-561,A:563-575,A:577-580,A:587-611,A:613-650)e8q3kA5(A:651-710,A:713-724,A:726-767,A:769-859)e8q3kA6(A:860-890,A:896-971,A:975-983,A:987-1037)e8q3kA7(A:1038-1079,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1289-1437)e8q3kA8(A:1080-1097,A:1102-1111,A:1228-1230,A:1234-1254,A:1258-1288)e8q3kA9(A:1112-1139,A:1142-1156,A:1159-1227)
7 domains
e8q3kB1(B:32-156,B:158-227,B:301-305,B:314-316,B:322-323,B:330-331,B:344-347,B:353-354,B:364-367,B:433-434,B:447-506,B:508-590,B:610-611)e8q3kB2(B:157-157,B:228-300,B:306-313,B:317-321,B:324-329,B:332-343,B:348-352,B:355-363,B:368-432,B:435-446,B:507-507)e8q3kB3(B:591-609,B:612-677,B:703-709)e8q3kB4(B:710-855)e8q3kB5(B:856-887,B:889-893,B:1007-1130)e8q3kB6(B:888-888,B:894-1006)e8q3kB7(B:1131-1211)
3 domains
2 domains
1 domain
All Domains (22)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8q3kA1 | A:1-311,A:393-395,A:437-439,A:539-541,A:562-562,A:576-576,A:581-586,A:612-612,A:711-712,A:725-725,A:768-768,A:891-895,A:972-974,A:984-986,A:1098-1101 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8q3kA2 | A:312-349,A:410-436,A:440-496 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8q3kA3 | A:350-392,A:396-409 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8q3kA4 | A:497-538,A:542-561,A:563-575,A:577-580,A:587-611,A:613-650 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8q3kA5 | A:651-710,A:713-724,A:726-767,A:769-859 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8q3kA6 | A:860-890,A:896-971,A:975-983,A:987-1037 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 7 | A | e8q3kA7 | A:1038-1079,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1289-1437 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 8 | A | e8q3kA8 | A:1080-1097,A:1102-1111,A:1228-1230,A:1234-1254,A:1258-1288 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | A | e8q3kA9 | A:1112-1139,A:1142-1156,A:1159-1227 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e8q3kB1 | B:32-156,B:158-227,B:301-305,B:314-316,B:322-323,B:330-331,B:344-347,B:353-354,B:364-367,B:433-434,B:447-506,B:508-590,B:610-611 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8q3kB2 | B:157-157,B:228-300,B:306-313,B:317-321,B:324-329,B:332-343,B:348-352,B:355-363,B:368-432,B:435-446,B:507-507 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8q3kB3 | B:591-609,B:612-677,B:703-709 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | B | e8q3kB4 | B:710-855 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8q3kB5 | B:856-887,B:889-893,B:1007-1130 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e8q3kB6 | B:888-888,B:894-1006 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8q3kB7 | B:1131-1211 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | C | e8q3kC1 | C:42-76,C:185-186 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 18 | C | e8q3kC2 | C:77-184 | 240.2.1.0 | 240 → 240.2 → 240.2.1 |
| 19 | C | e8q3kC3 | C:297-358 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 20 | E | e8q3kE1 | E:114-134 | 2008.3.1.0 | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e8q3kE2 | E:135-205 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e8q3kF1 | F:97-147 | 152.1.1.0 | 152 → 152.1 → 152.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors