ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8s3dD2 - ECOD Domain | ECOD

ECOD/Domains/e8s3dD2

e8s3dD2

UID: 005182627

PDB

Range: D:182-411
PDB: 8S3D chain D(all domains)

Molecule: Glutamate dehydrogenase

3D Structure

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Related Domains

Browse other domains in ELFV_dehydrog →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyELFV_dehydrog(2003.1.1.7)

Ligands

in contact, ≤ 4 Å

(2S)-2-azanyl-2-oxidanyl-pentanedioic acid8GL
GlycineGLY
Nicotinamide-adenine-dinucleotideNAD

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG
Tetraethylene glycol

Pfam Families

PF00208ELFV_dehydrog

Glutamate/Leucine/Phenylalanine/Valine dehydrogenase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 8S3D RCSB PDB: 8S3D PDBe: 8S3D

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