ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8s3dF1 - ECOD Domain | ECOD

ECOD/Domains/e8s3dF1

e8s3dF1

UID: 005182630

PDB

Range: F:1-181
PDB: 8S3D chain F(all domains)

Molecule: Glutamate dehydrogenase

3D Structure

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Related Domains

Browse other domains in ELFV_dehydrog_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupAminoacid dehydrogenase-like, N-terminal domain(2007.1.6)

FFamilyELFV_dehydrog_N(2007.1.6.3)

Ligands

in contact, ≤ 4 Å

(2S)-2-azanyl-2-oxidanyl-pentanedioic acid8GL
Calcium ionCA
metal
GlycineGLY
Sodium ionNA
metal
Nicotinamide-adenine-dinucleotideNAD

Pfam Families

PF02812ELFV_dehydrog_N

Glu/Leu/Phe/Val dehydrogenase, dimerisation domain

ClanCL0603AA_dh_N

External Links

ECOD PDB View: 8S3D RCSB PDB: 8S3D PDBe: 8S3D

Downloads

Download Domain PDB Full PDB Structure

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer.