ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8vvmA1 - ECOD Domain | ECOD

ECOD/Domains/e8vvmA1

e8vvmA1

UID: 005215394

PDB

Range: A:1-117
PDB: 8VVM chain A(all domains)

Molecule: S1CE1 VARIANT OF FAB-EPR-1 heavy chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 8VVM RCSB PDB: 8VVM PDBe: 8VVM

Downloads

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