ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8xisB2 - ECOD Domain | ECOD

ECOD/Domains/e8xisB2

e8xisB2

UID: 005229602

PDB

Range: B:425-465,B:471-513,B:519-601,B:603-633,B:641-654,B:660-701,B:705-718,B:723-725,B:734-819,B:824-860,B:869-902
PDB: 8XIS chain B(all domains)

Molecule: cellodextrin phosphorylase variant

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_36 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_36(109.2.1.36)

Ligands

in contact, ≤ 4 Å

beta-D-glucopyranoseBGC
Chloride ionCL

+ 4 additives (Acetate ion, Glycerol, DI(HYDROXYETHYL)ETHER, …)

Acetate ionACT
GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG
Phosphate ion

Pfam Families

PF17167Glyco_hydro_94

Glycosyl hydrolase 94 superfamily, catalytic domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 8XIS RCSB PDB: 8XIS PDBe: 8XIS

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