ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8yecC1 - ECOD Domain | ECOD

ECOD/Domains/e8yecC1

e8yecC1

UID: 005238488

PDB

Range: C:1-284
PDB: 8YEC chain C(all domains)

Molecule: Ketose 3-epimerase

3D Structure

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Related Domains

Browse other domains in AP_endonuc_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAP_endonuc_2(2002.1.1.60)

Ligands

in contact, ≤ 4 Å

D-fructoseFUD
Magnesium ionMG
metal
Sodium ionNA
metal
D-psicosePSJ

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHER

Pfam Families

PF01261AP_endonuc_2

Xylose isomerase-like TIM barrel

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 8YEC RCSB PDB: 8YEC PDBe: 8YEC

Downloads

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