ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9jowB1 - ECOD Domain | ECOD

ECOD/Domains/e9jowB1

e9jowB1

UID: 005303558

PDB

Range: B:9-271
PDB: 9JOW chain B(all domains)
UniProt: W8VZW3 (all domains)
Gene: ClR

Molecule: Chloride pumping rhodopsin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Bac_rhodopsin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFamily A G protein-coupled receptor-like(5001)

HH-groupFamily A G protein-coupled receptor-like(5001.1)

TT-groupFamily A G protein-coupled receptor-like(5001.1.1)

FFamilyBac_rhodopsin(5001.1.1.6)

Ligands

in contact, ≤ 4 Å

Octadecane8K6
(3~{S},4~{Z},6~{E},8~{Z},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E})-2,6,10,14,19,23-hexamethyl-25-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]pentacosa-4,6,8,10,12,14,16,18,20,22,24-undecaene-2,3-diolA1L4O
TetradecaneC14
Chloride ionCL
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

PF01036Bac_rhodopsin

Bacteriorhodopsin-like protein

ClanCL0192GPCR_A

External Links

ECOD PDB View: 9JOW RCSB PDB: 9JOW PDBe: 9JOW UniProt: W8VZW3

Downloads

Download Domain PDB Full PDB Structure

Diundecyl phosphatidyl choline

HexadecaneR16

RetinalRET

Shown in the structure viewer.