ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e9ykrA1 - ECOD Domain | ECOD

ECOD/Domains/e9ykrA1

e9ykrA1

UID: 005339105

PDB

Range: A:1005-1266
PDB: 9YKR chain A(all domains)

Molecule: Histone-lysine N-methyltransferase EHMT1

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

N~2~-[(7M)-6-fluoro-7-(2,5,6,7-tetrahydro-1H-azepin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]-N~4~,6-dimethylpyrimidine-2,4-diamineA1CXM
S-adenosylmethionineSAM
Zinc ionZN
metal

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sulfate ion)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 9YKR RCSB PDB: 9YKR PDBe: 9YKR

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.