ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e9ykrB1 - ECOD Domain | ECOD

ECOD/Domains/e9ykrB1

e9ykrB1

UID: 005339106

PDB

Range: B:1008-1266
PDB: 9YKR chain B(all domains)

Molecule: Histone-lysine N-methyltransferase EHMT1

3D Structure

Loading viewer...

Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

N~2~-[(7M)-6-fluoro-7-(2,5,6,7-tetrahydro-1H-azepin-4-yl)-2,3-dihydro-1-benzofuran-5-yl]-N~4~,6-dimethylpyrimidine-2,4-diamineA1CXM
S-adenosylmethionineSAM
Zinc ionZN
metal

+ 3 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sulfate ion)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHER

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 9YKR RCSB PDB: 9YKR PDBe: 9YKR

Downloads

Download Domain PDB Full PDB Structure

Sulfate ionSO4

Shown in the structure viewer.