ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ji4C1 - ECOD Domain | ECOD

ECOD/Domains/e1ji4C1

e1ji4C1

UID: 000055970

PDB

Range: C:1-144
PDB: 1JI4 chain C(all domains)
UniProt: P43313 (all domains)
Gene: dps

Molecule: NEUTROPHIL-ACTIVATING PROTEIN A

3D Structure

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Related Domains

Browse other domains in Ferritin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupFerritin(150.1.1)

FFamilyFerritin(150.1.1.1)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Unknown atom or ionUNX

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

PF00210Ferritin

Ferritin-like domain

ClanCL0044Ferritin

External Links

ECOD PDB View: 1JI4 RCSB PDB: 1JI4 PDBe: 1JI4 UniProt: P43313

Downloads

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DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.