ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2bedA1 - ECOD Domain | ECOD

ECOD/Domains/e2bedA1

e2bedA1

UID: 000059650

PDB

Range: A:55-366
PDB: 2BED chain A(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

(11S)-8-CHLORO-11-[1-(METHYLSULFONYL)PIPERIDIN-4-YL]-6-PIPERAZIN-1-YL-11H-BENZO[5,6]CYCLOHEPTA[1,2-B]PYRIDINE736
drugDrugBank DB07216
Farnesyl diphosphateFPP
drugDrugBank DB07780

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 2BED RCSB PDB: 2BED PDBe: 2BED UniProt: Q04631

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.