ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jcrA1 - ECOD Domain | ECOD

ECOD/Domains/e1jcrA1

e1jcrA1

UID: 000059670

PDB

Range: A:55-369
PDB: 1JCR chain A(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: PROTEIN FARNESYLTRANSFERASE, ALPHA SUBUNIT

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Shown in the structure viewer.

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 1JCR RCSB PDB: 1JCR PDBe: 1JCR UniProt: Q04631

Downloads

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Drug annotations from DrugDomain.