ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ckcB1 - ECOD Domain | ECOD

ECOD/Domains/e3ckcB1

e3ckcB1

UID: 000059898

PDB

Range: B:42-551
PDB: 3CKC chain B(all domains)
UniProt: Q8A1G2 (all domains)
Gene: susD

Molecule: SusD

3D Structure

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Related Domains

Browse other domains in SusD_RagB →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySusD_RagB(109.4.1.104)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF07980SusD_RagB

SusD family

ClanCL0020TPR

External Links

ECOD PDB View: 3CKC RCSB PDB: 3CKC PDBe: 3CKC UniProt: Q8A1G2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.