ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ef8A1 - ECOD Domain | ECOD

ECOD/Domains/e3ef8A1

e3ef8A1

UID: 000006408

RepresentativePDB

Range: A:1-149
PDB: 3EF8 chain A(all domains)
UniProt: Q2G8B5 (all domains)
Gene: Saro_1465

Molecule: Putative Scyalone Dehydratase

3D Structure

Loading viewer...

Related Domains

Browse other domains in SnoaL_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilySnoaL_4(243.1.1.26)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 3 additives (Triethylene glycol, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHER

Pfam Families

PF13577SnoaL_4

SnoaL-like domain

ClanCL0051NTF2

External Links

ECOD PDB View: 3EF8 RCSB PDB: 3EF8 PDBe: 3EF8 UniProt: Q2G8B5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.