ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3bbfF1 - ECOD Domain | ECOD

ECOD/Domains/e3bbfF1

e3bbfF1

UID: 000065552

PDB

Range: F:2-151
PDB: 3BBF chain F(all domains)
UniProt: P22392 (all domains)
Gene: NME2

Molecule: Nucleoside diphosphate kinase B

3D Structure

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Related Domains

Browse other domains in NDK →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupNucleoside diphosphate kinases(304.34)

TT-groupNucleoside diphosphate kinases(304.34.1)

FFamilyNDK(304.34.1.1)

Ligands

in contact, ≤ 4 Å

1,4-DithiothreitolDTT
drugDrugBank DB04447
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Pfam Families

Nucleoside diphosphate kinase

External Links

ECOD PDB View: 3BBF RCSB PDB: 3BBF PDBe: 3BBF UniProt: P22392

Downloads

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Magnesium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.