ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vj7A2 - ECOD Domain | ECOD

ECOD/Domains/e1vj7A2

e1vj7A2

UID: 000006824

RepresentativePDB

Range: A:197-341,A:363-371
PDB: 1VJ7 chain A(all domains)
UniProt: Q54089 (all domains)
Gene: relA

Molecule: Bifunctional RELA/SPOT

3D Structure

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Related Domains

Browse other domains in RelA_SpoT →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyRelA_SpoT(316.1.1.13)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04607RelA_SpoT

Region found in RelA / SpoT proteins

ClanCL0260NTP_transf

External Links

ECOD PDB View: 1VJ7 RCSB PDB: 1VJ7 PDBe: 1VJ7 UniProt: Q54089

Downloads

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