ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xm8A1 - ECOD Domain | ECOD

ECOD/Domains/e1xm8A1

e1xm8A1

UID: 000087843

PDB

Range: A:1-254
PDB: 1XM8 chain A(all domains)
UniProt: Q9SID3 (all domains)
Gene: At2g31350

Molecule: glyoxalase II

3D Structure

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Related Domains

Browse other domains in Lactamase_B,HAGH_C →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B,HAGH_C(247.1.1.5)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Zinc ionZN
metal

+ 2 additives (Acetic acid, DI(HYDROXYETHYL)ETHER)

Acetic acid

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

Hydroxyacylglutathione hydrolase C-terminus

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 1XM8 RCSB PDB: 1XM8 PDBe: 1XM8 UniProt: Q9SID3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03166

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.