ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8sA1 - ECOD Domain | ECOD

ECOD/Domains/e1r8sA1

e1r8sA1

UID: 000009591

RepresentativePDB

Range: A:18-177
PDB: 1R8S chain A(all domains)
UniProt: P84080 (all domains)
Gene: ARF1

Molecule: ADP-ribosylation factor 1

3D Structure

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Related Domains

Browse other domains in Arf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1R8S RCSB PDB: 1R8S PDBe: 1R8S UniProt: P84080

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfite ion

+ 2 additives (Formic acid, Sulfate ion)

Formic acidFMT
DrugBank DB01942
Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.