ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2q8zA1 - ECOD Domain | ECOD

ECOD/Domains/e2q8zA1

e2q8zA1

UID: 000096025

PDB

Range: A:2-323
PDB: 2Q8Z chain A(all domains)
UniProt: Q8IJH3 (all domains)
Gene: PF3D7_1023200

Molecule: Orotidine-monophosphate-decarboxylase

3D Structure

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Related Domains

Browse other domains in OMPdecase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyOMPdecase(2002.1.1.9)

Ligands

in contact, ≤ 4 Å

2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL7PE
6-AMINOURIDINE 5'-MONOPHOSPHATENUP

+ 2 additives (Sulfate ion, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4

Pfam Families

PF00215OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2Q8Z RCSB PDB: 2Q8Z PDBe: 2Q8Z UniProt: Q8IJH3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.