ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ijdB1 - ECOD Domain | ECOD

ECOD/Domains/e4ijdB1

e4ijdB1

UID: 000990476

PDB

Range: B:195-378
PDB: 4IJD chain B(all domains)
UniProt: Q9NQV7 (all domains)
Gene: PRDM9

Molecule: Histone-lysine N-methyltransferase PRDM9

3D Structure

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Related Domains

Browse other domains in PRDM2_PR →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilyPRDM2_PR(70.3.1.5)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21549PRDM2_PR

PR domain zinc finger protein 2, PR domain

ClanCL0489SAF

External Links

ECOD PDB View: 4IJD RCSB PDB: 4IJD PDBe: 4IJD UniProt: Q9NQV7

Downloads

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