F-group (family)
1.1.13.8 CoV_NSP9
Ligands and drugs
75
Member domains
36
with ligand contacts (≤ 4 Å)
48.0% of members
39
with DrugDomain annotations
52.0% of members
35
with a DrugBank compound
46.7% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 1.1.13.8 belongs to X-group 1 cradle loop barrel, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02082 | GNP | Phosphoaminophosphonic acid guanylate ester | 3 |
| DB03685 | U5P | Uridine monophosphate | 2 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 2 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 1 |
| DB04447 | DTT | 1,4-Dithiothreitol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ODN | (1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one | 8 |
| X0Y | 1,3-dimethyl-1H-pyrrolo[3,4-d]pyrimidine-2,4(3H,6H)-dione | 3 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| DTT | 2,3-DIHYDROXY-1,4-DITHIOBUTANE | 1 |
| GDP | GUANOSINE-5'-DIPHOSPHATE | 1 |
| GNP | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 1 |
| MNmetal | MANGANESE (II) ION | 1 |
| POP | PYROPHOSPHATE 2- | 1 |
| WSB | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]uridine | 1 |