T-group (topology)
1.1.9 PUA domain
Ligands and drugs
3,809
Member domains
561
with ligand contacts (≤ 4 Å)
14.7% of members
394
with DrugDomain annotations
10.3% of members
296
with a DrugBank compound
7.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 1.1.9 belongs to X-group 1 cradle loop barrel, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00118 | SAM | Ademetionine | 6 |
| DB17584 | QFC | Mezigdomide | 4 |
| DB02175 | MLA | Malonic acid | 2 |
| DB08840 | PJH | N-methylnicotinamide | 2 |
| DB12101 | 8W7 | Iberdomide | 2 |
| DB00142 | GLU | Glutamic acid | 1 |
| DB00480 | — | — | 1 |
| DB01041 | — | — | 1 |
| DB01752 | SAH | S-adenosyl-L-homocysteine | 1 |
| DB02210 | HEZ | Hexane-1,6-Diol | 1 |
| DB02661 | — | Adenosine-5'-diphosphate-2',3'-vanadate | 1 |
| DB03164 | M1A | 6-amino-1-methyl-7H-purin-1-ium | 1 |
| DB03434 | MPO | 3-(N-morpholino)propanesulfonic acid | 1 |
| DB03570 | 144 | Tris-Hydroxymethyl-Methyl-Ammonium | 1 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 1 |
| DB08910 | — | — | 1 |
| DB09459 | TLA | L-tartaric acid | 1 |
| DB09462 | — | Glycerin | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 63 |
| CL | CHLORIDE ION | 28 |
| MGmetal | MAGNESIUM ION | 28 |
| UNX | UNKNOWN ATOM OR ION | 27 |
| NAmetal | SODIUM ION | 20 |
| SCN | THIOCYANATE ION | 18 |
| CAmetal | CALCIUM ION | 13 |
| RN9 | 3-[3-[[1-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2,5-bis(oxidanylidene)pyrrol-3-yl]amino]phenyl]-~{N}-(3-chloranyl-4-methyl-phenyl)propanamide | 12 |
| CDmetal | CADMIUM ION | 10 |
| 6MD | N-methyladenosine | 9 |
| QFC | Mezigdomide | 9 |
| 9N8 | 4-(2-bromanyl-6-fluoranyl-phenyl)carbonyl-~{N}-pyridin-3-yl-1~{H}-pyrrole-2-carboxamide | 8 |
| OYK | ~{N},9-dimethylpurin-6-amine | 7 |
| A1A0J | (3S)-3-(3-methyl-2-oxo-2,3-dihydro-1H-1,3-benzimidazol-1-yl)piperidine-2,6-dione | 6 |
| GLU | GLUTAMIC ACID | 5 |
| 5ZK | ~{N},3-dimethyl-1~{H}-pyrazolo[4,3-d]pyrimidin-7-amine | 4 |
| Kmetal | POTASSIUM ION | 4 |
| OWH | ~{N}-methylpyridine-3-carbothioamide | 4 |
| OYN | 2-chloranyl-~{N}-methyl-9~{H}-purin-6-amine | 4 |
| OYT | 9-cyclopropyl-~{N}-methyl-purin-6-amine | 4 |