ECOD
F-group (family)

10.1.1.39 bCoV_S1_N

Open in classification tree →Pfam PF16451 →

Ligands and drugs

4,333
Member domains
3,327
with ligand contacts (≤ 4 Å)
76.8% of members
1,119
with DrugDomain annotations
25.8% of members
1,101
with a DrugBank compound
25.4% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 10.1.1.39 belongs to X-group 10 jelly-roll, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00141NAGN-Acetylglucosamine1,101
DB00158FOLFolic acid16
DB03721SIAN-acetyl-alpha-neuraminic acid9
DB02015DHFDihydrofolic Acid2

Most frequently bound compounds

PDB ligandNameDomains in contact
NAG2-acetamido-2-deoxy-beta-D-glucopyranose3,324
BLABILIVERDINE IX ALPHA51
FOLFOLIC ACID22
SIAN-acetyl-alpha-neuraminic acid9
BLR3-[5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-2-[[5-[(Z)-(3-ethenyl-4-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid6
MJJmethyl 9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid6
VCG2-hydroxyethyl 2-deoxy-3,5-bis-O-(2-hydroxyethyl)-6-O-(2-{[(9E)-octadec-9-enoyl]oxy}ethyl)-alpha-L-xylo-hexofuranoside6
IDU2-O-sulfo-beta-L-altropyranuronic acid3
CAmetalCALCIUM ION2
DHFDIHYDROFOLIC ACID2
UNXUNKNOWN ATOM OR ION2
3Q93-[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1H-pyrrol-2-yl]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid1
5N69-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid1
EICLINOLEIC ACID1