H-group (homology)

10.12 Double-stranded beta-helix

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Ligands and drugs

12,555

Member domains

4,591

with ligand contacts (≤ 4 Å)

36.6% of members

4,080

with DrugDomain annotations

32.5% of members

2,799

with a DrugBank compound

22.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 10.12 belongs to X-group 10 jelly-roll, which binds 8.5 ligand superclasses per 20 proteins, broader than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB08845	AKG	Oxogluric acid	511
DB02527	CMP	Cyclic adenosine monophosphate	273
DB02315	PCG	Cyclic GMP	129
DB00139	SIN	Succinic acid	109
DB03103	TYD	Thymidine-5'- Diphosphate	51
DB16881	88E	E-52862	36
DB00141	NAG	N-Acetylglucosamine	33
DB00125	ARG	Arginine	31
DB02025	ACV	ACV tripeptide	28
DB04216	QUE	Quercetin	28
DB04315	GDP	Guanosine-5'-Diphosphate	27
DB00123	LYS	Lysine	24
DB00151	CYS	Cysteine	23
DB00172	PRO	Proline	23
DB08327	OMD	Homogentisic acid	20
DB08687	UN9	FG-2216	20
DB09140	OXY	Oxygen	20
DB00126	—	Ascorbic acid	19
DB13673	9CS	Bekanamycin	18
DB00143	GSH	Glutathione	16

Most frequently bound compounds

PDB ligand	Name	Domains in contact
ZNmetal	ZINC ION	736
NImetal	NICKEL (II) ION	735
MNmetal	MANGANESE (II) ION	679
FEmetal	FE (III) ION	616
AKG	2-OXOGLUTARIC ACID	577
OGA	N-OXALYLGLYCINE	500
CL	CHLORIDE ION	472
FE2metal	FE (II) ION	455
CMP	ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE	341
MGmetal	MAGNESIUM ION	295
SIN	SUCCINIC ACID	155
NAmetal	SODIUM ION	142
PCG	CYCLIC GUANOSINE MONOPHOSPHATE	131
COmetal	COBALT (II) ION	120
CUmetal	COPPER (II) ION	81
LYS	LYSINE	56
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose	53
TYD	THYMIDINE-5'-DIPHOSPHATE	50
CAmetal	CALCIUM ION	47
AUmetal	GOLD ION	46