ECOD
F-group (family)

101.1.2.48 PadR

Open in classification tree →Pfam PF03551 →

Ligands and drugs

323
Member domains
89
with ligand contacts (≤ 4 Å)
27.6% of members
78
with DrugDomain annotations
24.1% of members
49
with a DrugBank compound
15.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 101.1.2.48 belongs to X-group 101 HTH, which binds 8.7 ligand superclasses per 20 proteins, broader than 73% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00694DM1Daunorubicin8
DB02130VNLVanillic acid4
DB03434MPO3-(N-morpholino)propanesulfonic acid2
DB00140RBFRiboflavin1
DB02365PHN1,10-Phenanthroline1
DB18267HEMFerroheme1

Most frequently bound compounds

PDB ligandNameDomains in contact
MNmetalMANGANESE (II) ION16
CLCHLORIDE ION9
DM1DAUNOMYCIN8
CUmetalCOPPER (II) ION5
8TF2,4-bis[(E)-(1-ethyl-3,3-dimethyl-indol-2-ylidene)methyl]cyclobutane-1,3-dione4
BRBROMIDE ION4
JY1bis[diethyl(methyl)-lambda~5~-phosphanyl]{bis[{[(2-{[2-(2,5-dioxopyrrolidin-1-yl)ethyl]amino}-2-oxoethyl)amino]methyl}(diethyl)-lambda~5~-phosphanyl]}rhodium4
VNL4-HYDROXY-3-METHOXYBENZOATE4
B3P2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2
CDmetalCADMIUM ION2
HGmetalMERCURY (II) ION2
MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID2
NImetalNICKEL (II) ION2
UNXUNKNOWN ATOM OR ION2
ZNmetalZINC ION2
AUmetalGOLD ION1
CAmetalCALCIUM ION1
GLCalpha-D-glucopyranose1
HEMPROTOPORPHYRIN IX CONTAINING FE1
HT12'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE1