ECOD
F-group (family)

12.3.1.18 Glyco_hydr_116N

Open in classification tree →Pfam PF12215 →

Ligands and drugs

74
Member domains
38
with ligand contacts (≤ 4 Å)
51.4% of members
33
with DrugDomain annotations
44.6% of members
27
with a DrugBank compound
36.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 12.3.1.18 belongs to X-group 12 Glycosyl hydrolase domain-like, which binds 6.5 ligand superclasses per 20 proteins, narrower than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB02379BGCBeta-D-Glucose6
DB04282G2F2-deoxy-2-fluoro-α-D-glucose2
DB04545IFMAfegostat2
DB02658NFG2,4-Dinitrophenyl 2-Deoxy-2-Fluoro-Beta-D-Allopyranoside1
DB03206NOJDuvoglustat1

Most frequently bound compounds

PDB ligandNameDomains in contact
BGCbeta-D-glucopyranose6
CLCHLORIDE ION5
MGmetalMAGNESIUM ION4
BXXbeta-D-arabinofuranose2
CAmetalCALCIUM ION2
G2F2-deoxy-2-fluoro-alpha-D-glucopyranose2
IFM5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE2
XHR(1R,2R,3R,4S)-4-[8-(azanyldiazenyl)octylamino]-3-(hydroxymethyl)cyclopentane-1,2-diol2
945[(1~{R},2~{R},3~{R},4~{S},5~{R})-2-(hydroxymethyl)-3,4,5,6-tetrakis(oxidanyl)cyclohexyl] hydrogen sulfate1
9FQ(3~{a}~{S},4~{R},5~{S},6~{R},7~{R},7~{a}~{R})-7-(hydroxymethyl)-2,2-bis(oxidanylidene)-3~{a},4,5,6,7,7~{a}-hexahydrobenzo[d][1,3,2]dioxathiole-4,5,6-triol1
AEZ(4~{S},5~{S},6~{R},7~{R})-7-(hydroxymethyl)-4,5,6,7-tetrahydro-1~{H}-benzimidazole-4,5,6-triol1
GIMGLUCOIMIDAZOLE1
GLCalpha-D-glucopyranose1
GLFalpha-D-glucopyranosyl fluoride1
NFG2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside1
NOJ1-DEOXYNOJIRIMYCIN1
PO8(1~{R},2~{S},3~{S},4~{S},5~{R},6~{R})-5-azanyl-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol1