F-group (family)
12.3.1.6 Bgal_small_N
Ligands and drugs
545
Member domains
247
with ligand contacts (≤ 4 Å)
45.3% of members
259
with DrugDomain annotations
47.5% of members
162
with a DrugBank compound
29.7% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 12.3.1.6 belongs to X-group 12 Glycosyl hydrolase domain-like, which binds 6.5 ligand superclasses per 20 proteins, narrower than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01862 | IPT | Isopropyl beta-D-thiogalactopyranoside | 33 |
| DB01885 | 149 | D-Galctopyranosyl-1-On | 32 |
| DB02228 | 2FG | 2-deoxy-2-fluoro-β-D-galactose | 20 |
| DB04382 | 2DG | 2-Deoxy-alpha-D-galactopyranose | 12 |
| DB02294 | GTZ | (5R,6S,7S,8S)-5-hydroxymethyl-6,7,8-trihydroxy-tetrazolo[1,5-A]piperidine | 8 |
| DB01920 | 145 | 1-O-[O-Nitrophenyl]-Beta-D-Galactopyranose | 5 |
| DB00536 | GAI | Guanidine | 4 |
| DB02379 | BGC | Beta-D-Glucose | 4 |
| DB02632 | 147 | 4-nitrophenyl-beta-D-galactoside | 4 |
| DB05018 | DGJ | Migalastat | 4 |
| DB01694 | TAR | D-tartaric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAmetal | SODIUM ION | 189 |
| IPT | 1-methylethyl 1-thio-beta-D-galactopyranoside | 45 |
| MGmetal | MAGNESIUM ION | 45 |
| 149 | D-galactonolactone | 17 |
| PTQ | 2-phenylethyl 1-thio-beta-D-galactopyranoside | 12 |
| GAL | beta-D-galactopyranose | 11 |
| GTZ | (5R, 6S, 7S, 8S)-5-HYDROXYMETHYL-6,7,8-TRIHYDROXY-TETRAZOLO[1,5-A]PIPERIDINE | 8 |
| CL | CHLORIDE ION | 6 |
| 145 | 2-nitrophenyl beta-D-galactopyranoside | 5 |
| Kmetal | POTASSIUM ION | 5 |
| 0MK | beta-L-ribopyranose | 4 |
| 147 | 4-nitrophenyl beta-D-galactopyranoside | 4 |
| DVL | 3-(1,3-benzothiazol-2-yl)-2-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]methoxy]-5-methyl-benzaldehyde | 4 |
| F4X | 8-[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-indol-1-ium-1-yl]octanoic acid | 4 |
| F6L | 4-[[2-[(E)-2-[4-[(2S,3R,4S,5R,6R)-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]ethenyl]-3,3-dimethyl-2H-indol-1-yl]methyl]benzoic acid | 4 |
| GAI | GUANIDINE | 4 |
| MNmetal | MANGANESE (II) ION | 4 |
| MN3metal | MANGANESE (III) ION | 4 |
| 2DG | 2-deoxy-alpha-D-galactopyranose | 1 |
| 2FG | 2-deoxy-2-fluoro-beta-D-galactopyranose | 1 |