F-group (family)
129.1.1.1 6PGD
Ligands and drugs
185
Member domains
70
with ligand contacts (≤ 4 Å)
37.8% of members
67
with DrugDomain annotations
36.2% of members
55
with a DrugBank compound
29.7% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 129.1.1.1 belongs to X-group 129 6-phosphogluconate dehydrogenase C-terminal domain-like, which binds 8.5 ligand superclasses per 20 proteins, broader than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02076 | 6PG | 6-phospho-D-gluconic acid | 15 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 13 |
| DB04496 | RES | 4-Phospho-D-erythronohydroxamic acid | 4 |
| DB02338 | NDP | NADPH | 3 |
| DB01914 | GLO | D-glucose | 2 |
| DB00789 | — | — | 1 |
| DB00851 | — | — | 1 |
| DB00920 | — | — | 1 |
| DB02363 | ATR | 2'-Monophosphoadenosine-5'-Diphosphate | 1 |
| DB03962 | — | Nicotinamide 8-bromo-adenine dinucleotide phosphate | 1 |
| DB04510 | 3PG | 3-phospho-D-glyceric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| 6PG | 6-PHOSPHOGLUCONIC ACID | 19 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 12 |
| CL | CHLORIDE ION | 10 |
| AGmetal | SILVER ION | 4 |
| RES | 4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID | 4 |
| MGmetal | MAGNESIUM ION | 3 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 3 |
| 5RP | RIBULOSE-5-PHOSPHATE | 2 |
| 8HS | [(4R,5R)-5-(hydroxycarbamoyl)-2,2-dimethyl-1,3-dioxolan-4-yl]methyl dihydrogen phosphate | 2 |
| AE3 | 2-(2-ETHOXYETHOXY)ETHANOL | 2 |
| ATR | 2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE | 2 |
| GLO | D-glucose | 2 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 2 |
| 3PG | 3-PHOSPHOGLYCERIC ACID | 1 |
| POP | PYROPHOSPHATE 2- | 1 |