ECOD
F-group (family)

129.1.1.16 NAD_binding_11

Open in classification tree →Pfam PF14833 →

Ligands and drugs

287
Member domains
90
with ligand contacts (≤ 4 Å)
31.4% of members
78
with DrugDomain annotations
27.2% of members
71
with a DrugBank compound
24.7% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 129.1.1.16 belongs to X-group 129 6-phosphogluconate dehydrogenase C-terminal domain-like, which binds 8.5 ligand superclasses per 20 proteins, broader than 68% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03461NAPNicotinamide adenine dinucleotide phosphate24
DB14128NADNadide23
DB02579AKRAcrylic Acid8
DB02338NDPNADPH7
DB00133SERSerine4
DB036883OHHydracrylic acid4
DB11326BO3Boric acid4
DB09459TLAL-tartaric acid3
DB00157—NADH1

Most frequently bound compounds

PDB ligandNameDomains in contact
NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE24
NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE22
NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE14
AKRACRYLIC ACID9
NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE5
7VD(2-oxopropyl)phosphonic acid4
BO3BORIC ACID4
HIU(2R)-3-HYDROXY-2-METHYLPROPANOIC ACID4
HUI(2S)-2-methyl-3-oxidanyl-propanoic acid4
LLQ(2~{S})-2,3-bis(oxidanyl)propane-1-sulfonic acid4
SERSERINE4
3OH3-HYDROXY-PROPANOIC ACID3
TLAL(+)-TARTARIC ACID3
NA7[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE2
CLCHLORIDE ION1
MGmetalMAGNESIUM ION1