F-group (family)
141.1.1.1 polyprenyl_synt
Ligands and drugs
1,156
Member domains
607
with ligand contacts (≤ 4 Å)
52.5% of members
561
with DrugDomain annotations
48.5% of members
443
with a DrugBank compound
38.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 141.1.1.1 belongs to X-group 141 Terpenoid synthases, which binds 8.7 ligand superclasses per 20 proteins, broader than 72% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04714 | IPE | ISOPENTENYL PYROPHOSPHATE | 85 |
| DB00399 | ZOL | Zoledronic acid | 42 |
| DB02552 | GPP | Geranyl Diphosphate | 23 |
| DB00884 | RIS | Risedronic acid | 20 |
| DB01785 | DMA | Dimethylallyl Diphosphate | 18 |
| DB04160 | PPV | Pyrophosphoric acid | 15 |
| DB02508 | IPR | Isopentyl Pyrophosphate | 13 |
| DB07780 | FPP | Farnesyl diphosphate | 13 |
| DB00710 | BFQ | Ibandronate | 9 |
| DB00282 | 210 | Pamidronic acid | 8 |
| DB06548 | M0N | Minodronic acid | 8 |
| DB02270 | DST | Dimethylallyl S-Thiolodiphosphate | 7 |
| DB03345 | BME | Mercaptoethanol | 7 |
| DB04695 | FPS | Farnesyl thiopyrophosphate | 5 |
| DB06931 | 252 | (1-HYDROXYNONANE-1,1-DIYL)BIS(PHOSPHONIC ACID) | 5 |
| DB07410 | B29 | [2-(3-DIBENZOFURAN-4-YL-PHENYL)-1-HYDROXY-1-PHOSPHONO-ETHYL]-PHOSPHONIC ACID | 5 |
| DB04349 | PGO | (S)-propane-1,2-diol | 3 |
| DB06830 | 028 | (1-HYDROXYHEPTANE-1,1-DIYL)BIS(PHOSPHONIC ACID) | 3 |
| DB07221 | 742 | (2,2-DIPHOSPHONOETHYL)(DODECYL)DIMETHYLPHOSPHONIUM | 3 |
| DB07873 | H23 | Lauryl alcohol diphosphonic acid | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 286 |
| IPE | 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE | 80 |
| ZNmetal | ZINC ION | 51 |
| ZOL | ZOLEDRONIC ACID | 44 |
| CL | CHLORIDE ION | 24 |
| GRG | GERANYLGERANYL DIPHOSPHATE | 22 |
| CAmetal | CALCIUM ION | 19 |
| RIS | 1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID | 19 |
| GPP | GERANYL DIPHOSPHATE | 18 |
| NAmetal | SODIUM ION | 17 |
| MNmetal | MANGANESE (II) ION | 15 |
| PPV | PYROPHOSPHATE | 15 |
| IPR | ISOPENTYL PYROPHOSPHATE | 13 |
| FPP | FARNESYL DIPHOSPHATE | 12 |
| UNL | Unknown ligand | 12 |
| NI9 | 3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM | 11 |
| BFQ | IBANDRONATE | 9 |
| 04M | 5-(morpholin-4-ylsulfonyl)-2-{[3-(octyloxy)benzyl]oxy}benzoic acid | 8 |
| 476 | 3-butyl-1-(2,2-diphosphonoethyl)pyridinium | 8 |
| 210 | PAMIDRONATE | 7 |