T-group (topology)
148.1.1 Histone
Ligands and drugs
11,964
Member domains
922
with ligand contacts (≤ 4 Å)
7.7% of members
946
with DrugDomain annotations
7.9% of members
284
with a DrugBank compound
2.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 148.1.1 belongs to X-group 148 Histone-like, which binds 6.2 ligand superclasses per 20 proteins, narrower than 73% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03266 | PTD | Glutaral | 48 |
| DB00118 | SAM | Ademetionine | 5 |
| DB03709 | BCN | Bicine | 4 |
| DB04786 | SVR | Suramin | 4 |
| DB03147 | FAD | Flavin adenine dinucleotide | 3 |
| DB01992 | COA | Coenzyme A | 2 |
| DB02530 | ABU | gamma-Aminobutyric acid | 2 |
| DB04160 | PPV | Pyrophosphoric acid | 2 |
| DB00171 | ATP | ATP | 1 |
| DB00242 | — | Cladribine | 1 |
| DB00515 | CPT | Cisplatin | 1 |
| DB01752 | SAH | S-adenosyl-L-homocysteine | 1 |
| DB01910 | SFG | Sinefungin | 1 |
| DB02983 | PMB | Para-Mercury-Benzenesulfonic Acid | 1 |
| DB03107 | BAL | beta-Alanine | 1 |
| DB09130 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 421 |
| MNmetal | MANGANESE (II) ION | 138 |
| PTD | PENTANEDIAL | 59 |
| CAmetal | CALCIUM ION | 50 |
| MGmetal | MAGNESIUM ION | 31 |
| PTmetal | PLATINUM (II) ION | 14 |
| Kmetal | POTASSIUM ION | 12 |
| ZNmetal | ZINC ION | 12 |
| NAmetal | SODIUM ION | 9 |
| RU7 | PARA-CYMENE RUTHENIUM CHLORIDE | 8 |
| RUD | [ethane6-3-(p-tolyl)propanoic acid]Ru(1,3,5-triaza-7-phosphaadamantane)Cl2 | 8 |
| NImetal | NICKEL (II) ION | 7 |
| SAM | S-ADENOSYLMETHIONINE | 7 |
| 1MK | chlorido(eta-6-p-cymene)(N-fluorophenyl-2-pyridinecarbothioamide)osmium(II) | 6 |
| ELJ | chlorido(eta-6-p-cymene)(N-phenyl-2-pyridinecarbothioamide)osmium(II) | 6 |
| IOD | IODIDE ION | 6 |
| UNX | UNKNOWN ATOM OR ION | 6 |
| COmetal | COBALT (II) ION | 5 |
| 4A6 | [(1,2,3,4,5,6-eta)-1-methyl-4-(propan-2-yl)benzene]ruthenium | 4 |
| BCN | BICINE | 4 |