ECOD
F-group (family)

177.1.1.2 S1-P1_nuclease

Open in classification tree →Pfam PF02265 →

Ligands and drugs

84
Member domains
39
with ligand contacts (≤ 4 Å)
46.4% of members
26
with DrugDomain annotations
31.0% of members
22
with a DrugBank compound
26.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 177.1.1.2 belongs to X-group 177 Phospholipase C/P1 nuclease, which has 10 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00141NAGN-Acetylglucosamine16
DB02594DCZDoxecitine3
DB00131AMPAdenosine phosphate2
DB02745URIUridine2
DB03403C5PCytidine-5'-Monophosphate2
DB00173ADEAdenine1
DB01643TMPThymidine monophosphate1
DB02980THSThymidine-5'-(dithio)phosphate1
DB03798DCM2'-Deoxycytidine-5'-Monophosphate1
DB04332ETE2-{2-[2-2-(Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol1

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION39
NAG2-acetamido-2-deoxy-beta-D-glucopyranose15
NAmetalSODIUM ION9
C5PCYTIDINE-5'-MONOPHOSPHATE6
CAmetalCALCIUM ION4
CLCHLORIDE ION4
5GPGUANOSINE-5'-MONOPHOSPHATE3
AMPADENOSINE MONOPHOSPHATE3
DCZ2'-DEOXYCYTIDINE3
U5PURIDINE-5'-MONOPHOSPHATE2
URIURIDINE2
ADEADENINE1
AS2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE1
D5M2'-DEOXYADENOSINE-5'-MONOPHOSPHATE1
DCM2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE1
ETE2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL1
GNG2'-DEOXY-GUANOSINE1
TMPTHYMIDINE-5'-PHOSPHATE1