X-group (possible homology)

194 Serum albumin-like

Ligands and drugs

1,200
Member domains
780
with ligand contacts (≤ 4 Å)
65.0% of members
529
with DrugDomain annotations
44.1% of members
408
with a DrugBank compound
34.0% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

10
Proteins with classified ligands
14
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Lignans, neolignans and related compounds10.0136×not tested
Organohalogen compounds10.036×not tested
Alkaloids and derivatives10.030×not tested
Phenylpropanoids and polyketides30.215×not tested
Benzenoids70.79.71×not tested
Mixed metal/non-metal compounds10.24.83×not tested
Lipids and lipid-like molecules51.14.55×not tested
Organic acids and derivatives61.53.93×not tested
Organic nitrogen compounds10.33.18×not tested
Organic oxygen compounds62.03.06×not tested
Homogeneous non-metal compounds52.12.36×not tested
Organoheterocyclic compounds21.51.32×not tested
Homogeneous metal compounds34.80.62×not tested
Nucleosides, nucleotides, and analogues12.70.37×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB08231MYRMyristic acid86
DB03796PLMPalmitic Acid33
DB00139SINSuccinic acid15
DB00788NPSNaproxen13
DB00586DIFDiclofenac12
DB04674DIU2-HYDROXY-3,5-DIIODOBENZOIC ACID12
DB04519OCACaprylic acid11
DB012389SCAripiprazole10
DB00172PROProline9
DB14104EICLinoleic acid9
DB00451T44Levothyroxine7
DB00515CPTCisplatin7
DB00812P1ZPhenylbutazone7
DB08496RWF(R)-warfarin7
DB09213IBPDexibuprofen7
DB00150TRPTryptophan6
DB01646AMEN-Acetylmethionine6
DB03017DAOLauric acid6
DB04257PAMPalmitoleic Acid6
DB00141NAGN-Acetylglucosamine5

Most frequently bound compounds

PDB ligandNameDomains in contact
MYRMYRISTIC ACID220
PLMPALMITIC ACID75
SINSUCCINIC ACID26
CLCHLORIDE ION22
PROPROLINE22
T443,5,3',5'-TETRAIODO-L-THYRONINE21
OCAOCTANOIC ACID (CAPRYLIC ACID)18
ZNmetalZINC ION17
DIU2-HYDROXY-3,5-DIIODO-BENZOIC ACID16
DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID15
LMR(2S)-2-hydroxybutanedioic acid15
UNXUNKNOWN ATOM OR ION15
NPS(2S)-2-(6-methoxynaphthalen-2-yl)propanoic acid14
CAmetalCALCIUM ION13
IMNINDOMETHACIN13
JEFO-(O-(2-AMINOPROPYL)-O'-(2-METHOXYETHYL)POLYPROPYLENE GLYCOL 500)12
COmetalCOBALT (II) ION11
9SC7-[4-[4-[2,3-bis(chloranyl)phenyl]piperazin-1-yl]butoxy]-3,4-dihydro-1H-quinolin-2-one10
CPTCisplatin10
OLAOLEIC ACID10