T-group (topology)
2.6.1 Staphylococcal nuclease
Ligands and drugs
1,068
Member domains
274
with ligand contacts (≤ 4 Å)
25.7% of members
266
with DrugDomain annotations
24.9% of members
258
with a DrugBank compound
24.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2.6.1 belongs to X-group 2 OB-fold, which binds 7.0 ligand superclasses per 20 proteins, narrower than 59% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04205 | THP | Thymidine-3',5'-Diphosphate | 215 |
| DB00135 | TYR | Tyrosine | 4 |
| DB02302 | 2MR | Symmetric dimethylarginine | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| THP | THYMIDINE-3',5'-DIPHOSPHATE | 222 |
| CAmetal | CALCIUM ION | 206 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 10 |
| CSmetal | CESIUM ION | 5 |
| UNX | UNKNOWN ATOM OR ION | 5 |
| QOV | 5-chloro-2-methoxy-N-(2-methyl[1,2,4]triazolo[1,5-a]pyridin-8-yl)benzene-1-sulfonamide | 4 |
| QOY | 5-chloro-2-methoxy-N-([1,2,4]triazolo[1,5-a]pyridin-8-yl)benzene-1-sulfonamide | 4 |
| 2MR | N3, N4-DIMETHYLARGININE | 3 |
| COmetal | COBALT (II) ION | 2 |
| TYR | TYROSINE | 1 |