F-group (family)
2002.1.1.106 GDPD
Ligands and drugs
340
Member domains
77
with ligand contacts (≤ 4 Å)
22.6% of members
71
with DrugDomain annotations
20.9% of members
58
with a DrugBank compound
17.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2002.1.1.106 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02515 | G3P | sn-glycerol 3-phosphate | 2 |
| DB02831 | 2HP | Dihydrogenphosphate | 2 |
| DB00122 | CHT | Choline | 1 |
| DB03709 | BCN | Bicine | 1 |
| DB03796 | PLM | Palmitic Acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 27 |
| NAmetal | SODIUM ION | 17 |
| CAmetal | CALCIUM ION | 11 |
| CL | CHLORIDE ION | 8 |
| G3P | SN-GLYCEROL-3-PHOSPHATE | 6 |
| UNL | Unknown ligand | 6 |
| ZNmetal | ZINC ION | 6 |
| KIP | [(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{5}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate | 4 |
| 2HP | DIHYDROGENPHOSPHATE ION | 2 |
| FEmetal | FE (III) ION | 2 |
| NImetal | NICKEL (II) ION | 2 |
| BCN | BICINE | 1 |
| CHT | CHOLINE ION | 1 |
| PLM | PALMITIC ACID | 1 |